Plotting: PL

Plotting: PL#

pl.phate(adata, *[, color, mask_obs, ...])

Scatter plot in PHATE basis.

pl.trimap(adata, *[, color, mask_obs, ...])

Scatter plot in TriMap basis.

pl.sam(adata[, projection, c, cmap, ...])

Scatter plot using the SAM projection or another input projection.

pl.wishbone_marker_trajectory(adata, markers, *)

Plot marker trends along trajectory, and return trajectory branches for further analysis and visualization (heatmap, etc..)