scanpy.pp.recipe_seurat

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scanpy.pp.recipe_seurat#

scanpy.pp.recipe_seurat(adata, *, log=True, plot=False, copy=False)[source]#

Normalization and filtering as of Seurat [Satija15].

This uses a particular preprocessing.

Expects non-logarithmized data. If using logarithmized data, pass log=False.

Return type:

AnnData | None