scanpy.pl.ranking

Contents

scanpy.pl.ranking#

scanpy.pl.ranking(adata, attr, keys, *, dictionary=None, indices=None, labels=None, color='black', n_points=30, log=False, include_lowest=False, show=None)[source]#

Plot rankings.

See, for example, how this is used in pl.pca_loadings.

Parameters:
adata AnnData

The data.

attr Literal['var', 'obs', 'uns', 'varm', 'obsm']

The attribute of AnnData that contains the score.

keys str | Sequence[str]

The scores to look up an array from the attribute of adata.

Return type:

GridSpec | None

Returns:

Returns matplotlib gridspec with access to the axes.